Supplementary file 1: A simple Illumina mRNA-Seq data pre-processing and analysis pipeline for well-annotated plants
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Date
2023-01-10
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Protocols.io
Abstract
This is an easy-to-follow protocol for pre-processing Illumina mRNA-Seq data, alignment and quantification including basic data analyses in RStudio.
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Keywords
dataset, mRNA-Seq, RNA-Seq, preprocessing, pre-processing, integrity, trimming, quality control, fastqc, trimmomatic, kallisto, RStudio, R, analysis, statistics